Prediction of Metabolic Syndrome Based on Machine Learning Techniques with Emphasis on Feature Relevances and Explainability Analysis

Begoña Ispizua*, Diana Manjarrés, Iratxe Niño-Adan

*Corresponding author for this work

Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

Abstract

Metabolic syndrome (MetS) is considered to be a major public health problem worldwide leading to a high risk of diabetes and cardiovascular diseases. In this paper, data collected by the Precision Medicine Initiative of the Basque Country, named the AKRIBEA project, is employed to infer via Machine Learning (ML) techniques the features that have the most influence on predicting MetS in the general case and also separately by gender. Different Feature Normalization (FN) and Feature Weighting (FW) methods are applied and an exhaustive analysis of explainability by means of Shapley Additive Explanations (SHAP) and feature relevance methods is performed. Validation results show that the Extreme Gradient Boosting (XGB) with Min-Max FN and Mutual Information FW achieves the best trade-off between precision and recall performance metrics.

Original languageEnglish
Title of host publicationProceedings - 2023 2023 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2023
EditorsXingpeng Jiang, Haiying Wang, Reda Alhajj, Xiaohua Hu, Felix Engel, Mufti Mahmud, Nadia Pisanti, Xuefeng Cui, Hong Song
PublisherInstitute of Electrical and Electronics Engineers Inc.
Pages1989-1992
Number of pages4
ISBN (Electronic)9798350337488
DOIs
Publication statusPublished - 2023
Event2023 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2023 - Istanbul, Turkey
Duration: 5 Dec 20238 Dec 2023

Publication series

NameProceedings - 2023 2023 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2023

Conference

Conference2023 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2023
Country/TerritoryTurkey
CityIstanbul
Period5/12/238/12/23

Keywords

  • classification
  • explainability
  • feature relevances
  • machine learning
  • metabolic syndrome

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